The UMD website


If you refer to UMD in any publication, please cite: Beroud C, Collod-Beroud G, Boileau C, Soussi T, Junien C. UMD (Universal mutation database): a generic software to build and analyze locus-specific databases. Hum Mutat 2000; 15: 86-94.


UMD-APC
  1. Beroud C, Soussi T. APC gene: database of germline and somatic mutations in human tumors and cell lines. Nucleic Acids Res 1996; 24: 121-4.
  2. Beroud C, Soussi T. p53 and APC gene mutations: software and databases. Nucleic Acids Res 1997; 25: 138.
  3. Laurent-Puig P, Beroud C, Soussi T. APC gene: database of germline and somatic mutations in human tumors and cell lines. Nucleic Acids Res 1998; 26: 269-70.

UMD-FBN1
  1. Collod G, Beroud C, Soussi T, Junien C, Boileau C. Software and database for the analysis of mutations in the human FBN1 gene. Nucleic Acids Res 1996; 24: 137-40.
  2. Collod-Beroud G, Beroud C, Ades L, Black C, Boxer M, Brock D J, Godfrey M, Hayward C, Karttunen L, Milewicz D, Peltonen L, Richards R I, Wang M, Junien C, Boileau C. Marfan Database (second edition): software and database for the analysis of mutations in the human FBN1 gene. Nucleic Acids Res 1997; 25: 147-50.
  3. Collod-Beroud G, Beroud C, Ades L, Black C, Boxer M, Brock D J, Holman K J, de Paepe A, Francke U, Grau U, Hayward C, Klein H G, Liu W, Nuytinck L, Peltonen L, Alvarez Perez A B, Rantamaki T, Junien C, Boileau C. Marfan Database (third edition): new mutations and new routines for the software. Nucleic Acids Res 1998; 26: 229-3.

UMD-LDLR
  1. Varret M, Rabes J P, Collod-Beroud G, Junien C, Boileau C, Beroud C. Software and database for the analysis of mutations in the human LDL receptor gene. Nucleic Acids Res 1997; 25: 172-80.
  2. Varret M, Rabes J P, Thiart R, Kotze M J, Baron H, Cenarro A, Descamps O, Ebhardt M, Hondelijn J C, Kostner G M, Miyake Y, Pocovi M, Schmidt H, Schuster H, Stuhrmann M, Yamamura T, Junien C, Beroud C, Boileau C. LDLR Database (second edition): new additions to the database and the software, and results of the first molecular analysis. Nucleic Acids Res 1998; 26: 248-52.
  3. Villeger L, Abifadel M, Allard D, Rabes J P, Thiart R, Kotze M J, Beroud C, Junien C, Boileau C, Varret M. The UMD-LDLR database: additions to the software and 490 new entries to the database. Hum Mutat 2002; 20: 81-7.

UMD-MEN1
  1. Wautot V, Vercherat C, Lespinasse J, Chambe B, Lenoir G M, Zhang C X, Porchet N, Cordier M, Beroud C, Calender A. Germline mutation profile of MEN1 in multiple endocrine neoplasia type 1: search for correlation between phenotype and the functional domains of the MEN1 protein. Hum Mutat 2002; 20: 35-47.

UMD-p53
  1. Beroud C, Verdier F, Soussi T. p53 gene mutation: software and database. Nucleic Acids Res 1996; 24: 147-50.
  2. Beroud C, Soussi T. p53 and APC gene mutations: software and databases. Nucleic Acids Res 1997; 25: 138.
  3. Beroud C, Soussi T. p53 gene mutation: software and database. Nucleic Acids Res 1998; 26: 200-4.
  4. Soussi T, Dehouche K, Beroud C. p53 website and analysis of p53 gene mutations in human cancer: forging a link between epidemiology and carcinogenesis. Hum Mutat 2000; 15: 105-13.
  5. Soussi T, Beroud C. Assessing TP53 status in human tumours to evaluate clinical outcome. Nat Rev Cancer 2001; 1: 233-40.
  6. Beroud C, Soussi T. The UMD-p53 database: New mutations and analysis tools. Hum Mutat 2003; 21: 176-81.
  7. Soussi T, Beroud C. Significance of TP53 mutations in human cancer: A critical analysis of mutations at CpG dinucleotides. Hum Mutat 2003; 21: 192-200.

UMD-VHL
  1. Beroud C, Joly D, Gallou C, Staroz F, Orfanelli M T, Junien C. Software and database for the analysis of mutations in the VHL gene. Nucleic Acids Res 1998; 26: 256-8.

UMD-WT1
  1. Jeanpierre C, Beroud C, Niaudet P, Junien C. Software and database for the analysis of mutations in the human WT1 gene. Nucleic Acids Res 1998; 26: 271-4.