This option is used to check if
a repeated sequence could be involved in the mutational event.
The repeated sequences is usually localized at each extremity
of the deletion. This situation if found habitually when a deletion
involving more than 2 nt is present. When the deletion involves
only 1 nt, it is mostly localized in a stretch of this nucleotide
(polyC for example). |
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Total number of deletions: 109 (322 records) Small deletions with known sequences: 109 (322 records) Deletions involving repeated sequences: 60 (55.05 %) |
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By default, the following table is sorted by "number of records". You can sort the table in ascending or descending order or by clicking on the appropriate column.
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| AA Position | Mutation | Repeated sequence | Number of records | Deletion / Repeated sequences |
|---|---|---|---|---|
| 40 | c.119delG | GGGG | cgaccaccacagtgcgccttttcgaccgggGcgacttctatacggcgcacggcgaggacg | |
| 529 | c.1585delG | GG | tttggatattactttcgtgtaacctgtaagGaagaaaaagtccttcgtaacaataaaaac | |
| 37 | c.110delT | TTTT | cggagaagccgaccaccacagtgcgcctttTcgaccggggcgacttctatacggcgcacg | |
| 152 | c.454delA | AAAA | tcagcttccattggtgttgtgggtgttaaaAtgtccgcagttgatggccagagacaggtt | |
| 731 | c.2191delG | GG | ggagtctccacgttcatggctgaaatgttgGaaactgcttctatcctcaggtctgcaacc | |
| 888 | c.2662delC | CC | gagcaaggtgaaaaaattattcaggagttcCtgtccaaggtgaaacaaatgccctttact | |
| 291 | c.873_876delGACT | ACT | agatgattccaactttggacagtttgaactGACTacttttgacttcagccagtatatgaaat | |
| 878 | c.2633_2634delAG | AG | cagcagcaaagaagtgctatctggaaagagAGcaaggtgaaaaaattattcaggagttcct | |
| 237 | c.711_714delTTAT | AT | aaaaaaagctgacttttccacaaaagacatTTATcaggacctcaaccggttgttgaaaggca | |
| 77 | c.229_230delAG | AG | atggggccggcaggagcaaagaatctgcagAGtgttgtgcttagtaaaatgaattttgaat | |
| 559 | c.1676delT | TTT | ttaaatttaccaacagcaaattgacttcttTaaatgaagagtataccaaaaataaaacag | |
| 176 | c.528_529delTG | TG | ggattccatacagaggaaactaggactgtgTGaattccctgataatgatcagttctccaat | |
| 249 | c.746delA | AAAAA | aggacctcaaccggttgttgaaaggcaaaaAgggagagcagatgaatagtgctgtattgc | |
| 841 | c.2521delA | AA | gcagagcttgctaatttccctaagcatgtaAtagagtgtgctaaacagaaagccctggaa | |
| 56 | c.166delG | GGG | cacggcgaggacgcgctgctggccgcccggGaggtgttcaagacccagggggtgatcaag | |
| 88 | c.264delT | TTTT | tgtgcttagtaaaatgaattttgaatctttTgtaaaagatcttcttctggttcgtcagta | |
| 595 | c.1783_1786delCTCA | CA | tcttcaggctatgtagaaccaatgcagacaCTCAatgatgtgttagctcagctagatgctgt | |
| 326 | c.976_977delCT | CT | tctgttgaagataccactggctctcagtctCTggctgccttgctgaataagtgtaaaaccc | |
| 752 | c.2254delA | AA | gattcattaataatcatagatgaattgggaAgaggaacttctacctacgatggatttggg | |
| 98 | c.294_295delTA | TA | tgtaaaagatcttcttctggttcgtcagtaTAgagttgaagtttataagaatagagctgga | |
| 93 | c.279_281delTCT | TCT | gaattttgaatcttttgtaaaagatcttctTCTggttcgtcagtatagagttgaagtttat | |
| 28 | c.82delG | GG | ggcttcgtgcgcttctttcagggcatgccgGagaagccgaccaccacagtgcgccttttc | |
| 538 | c.1613delA | AAAAA | aggaagaaaaagtccttcgtaacaataaaaActttagtactgtagatatccagaagaatg | |
| 702 | c.2106_2135del | AGT | tgtgagtcagcagaagtGTCCATTGTGGACTGCATCTTAGCCCGAGTaggggctggtgacag | |
| 129 | c.387_388delTC | TC | ggcatataaggcttctcctggcaatctctcTCagtttgaagacattctctttggtaacaat | |
| 229 | c.687delA | AAAAAAA | aggaggaattctgatcacagaaagaaaaaaAgctgacttttccacaaaagacatttatca | |
| 270 | c.810_811delGT | CTG | aatggagaatcaggttgcagtttcatcactGTctgcggtaatcaagtttttagaactctta | |
| 191 | c.571_573delCTC | CTC | aatgatcagttctccaatcttgaggctctcCTCatccagattggaccaaaggaatgtgttt | |
| 151 | c.453_454delAA | AA | gtcagcttccattggtgttgtgggtgttaaAAtgtccgcagttgatggccagagacaggtt | |
| 333 | c.998_999delGT | GT | ctcagtctctggctgccttgctgaataagtGTaaaacccctcaaggacaaagacttgttaa | |
| 792 | c.2375delA | AA | cccattttcatgaacttactgccttggccaAtcagataccaactgttaataatctacatg | |
| 271 | c.811_814delTCTG | CTG | atggagaatcaggttgcagtttcatcactgTCTGcggtaatcaagtttttagaactcttatc | |
| 99 | c.297_298delAG | AG | aaaagatcttcttctggttcgtcagtatagAGttgaagtttataagaatagagctggaaat | |
| 860 | c.2579_2592del | ATC | gaggagtttcagtatattggagaatCGCAAGGATATGATatcatggaaccagcagcaaagaa | |
| 116 | c.347_350delATTG | TG | gagctggaaataaggcatccaaggagaatgATTGgtatttggcatataaggcttctcctggc | |
| 350 | c.1049_1050delTC | TC | gacttgttaaccagtggattaagcagcctcTCatggataagaacagaatagaggagagatt | |
| 63 | c.187delG | GGGGG | gccgcccgggaggtgttcaagacccaggggGtgatcaagtacatggggccggcaggagca | |
| 722 | c.2166_2173del | GT | gggctggtgacagtcaattgaaaggagtCTCCACGTtcatggctgaaatgttggaaactgct | |
| 859 | c.2576_2584del | AG | gaacttgaggagtttcagtatattggagAATCGCAAGgatatgatatcatggaaccagcagc | |
| 179 | c.536delC | CCC | tacagaggaaactaggactgtgtgaattccCtgataatgatcagttctccaatcttgagg | |
| 526 | c.1576delA | AA | agtgcacagtttggatattactttcgtgtaAcctgtaaggaagaaaaagtccttcgtaac | |
| 407 | c.1221_1222delCT | CT | agcagcaaacttacaagattgttaccgactCTatcagggtataaatcaactacctaatgtt | |
| 572 | c.1716delA | AA | gtataccaaaaataaaacagaatatgaagaAgcccaggatgccattgttaaagaaattgt | |
| 833 | c.2499delT | TT | tcaaagttttgggattcatgttgcagagctTgctaatttccctaagcatgtaatagagtg | |
| 55 | c.163delC | CCC | gcgcacggcgaggacgcgctgctggccgccCgggaggtgttcaagacccagggggtgatc | |
| 625 | c.1874delT | TTTT | cacctgttccatatgtacgaccagccatttTggagaaaggacaaggaagaattatattaa | |
| 672 | c.2014_2033del | ATATG | ccacatcattactggccccaatATGGGAGGTAAATCAACATAtattcgacaaactggggtga | |
| 745 | c.2235_2237delAAT | AAT | cctcaggtctgcaaccaaagattcattaatAATcatagatgaattgggaagaggaacttct | |
| 290 | c.870delA | AA | atcagatgattccaactttggacagtttgaActgactacttttgacttcagccagtatat | |
| 250 | c.749delG | GGG | acctcaaccggttgttgaaaggcaaaaaggGagagcagatgaatagtgctgtattgccag | |
| 847 | c.2541_2547del | GAA | aagcatgtaatagagtgtgctaaacagaaAGCCCTGgaacttgaggagtttcagtatattgg | |
| 659 | c.1977delA | AAAAA | atttattcctaatgacgtatactttgaaaaAgataaacagatgttccacatcattactgg | |
| 465 | c.1394delA | AAAA | aaacaactttagatatggatcaggtggaaaAccatgaattccttgtaaaaccttcatttg | |
| 232 | c.696_697delTT | TT | tctgatcacagaaagaaaaaaagctgacttTTccacaaaagacatttatcaggacctcaac | |
| 264 | c.792delG | GG | tagtgctgtattgccagaaatggagaatcaGgttgcagtttcatcactgtctgcggtaat | |
| 25 | c.73_100del | CAG | ttcgtgcgcttctttcagGGCATGCCGGAGAAGCCGACCACCACAGtgcgccttttcgaccg | |
| 45 | c.135_136delGC | ACGGCG | ccttttcgaccggggcgacttctatacggcGCacggcgaggacgcgctgctggccgcccgg | |
| 488 | c.1463delT | TT | tcagtgaattaagagaaataatgaatgactTggaaaagaagatgcagtcaacattaataa | |
| 147 | c.439_440delGT | GT | ggtaacaatgatatgtcagcttccattggtGTtgtgggtgttaaaatgtccgcagttgatg | |
| 585 | c.1753_1756delTCTT | TT | gatgccattgttaaagaaattgtcaatattTCTTcaggctatgtagaaccaatgcagacact |