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This option is used to check if a repeated sequence could
be involved in the mutational event. In this hypothesis, a repeated
sequence is created by the insertion process to complete a partially
duplicated sequence.
For example the CGA sequence is inserted in the ctttctacgattaattaaggca and result in ctttctacgattaaCGAttaaggca. the repated sequence created by the insertion process is cgattaa (ctttctaCGATTAACGATTAAggca).
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Total number of insertions: 100 (108 records) Small insertions with known sequences: 100 (108 records) Insertions involving repeated sequences: 90 (90 %) |
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By default, the following table is sorted by "number of records". You can sort the table in ascending or descending order or by clicking on the appropriate column.
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| AA Position | Mutation | Repeated sequence | Number of records | Insertion / Repeated sequences |
|---|---|---|---|---|
| 2062 | c.6185dup | AA | tgccaagatttgcgaatgagctactgttaAtgcgaagtttgaaggaggaaagtgttcatc | |
| 1689 | c.5065dup | GGG | caagtgaatgggggaaataattgcatggGatatgagaagaagtttgtgctacagaaacta | |
| 320 | c.959dup | AC | acttttgcaaatgtccccctggtttttaAcacctctccagatggtaccagatgcatagat | |
| 1829 | c.5470_5484dup | TGCATCAACACTGCA | tgcatcaacactgcaTGCATCAACACTGCAggcagctaccgctgtgactgtaagcccggc | |
| 524 | c.1570dup | AA | gtgccgagctggatatcagagcacactcaAcgcggacagaatgccgagacattgatgagt | |
| 1554 | c.4661dup | GGG | gagatacagcctgcagcaatgaaattggGagttggtgtttccaaagcttcctgctgctgt | |
| 1895 | c.5684insTT | TG | aaaccatgtgcttggacataaatgaatTTgtgaaagagatgcctgtgggaatggaacttg | |
| 1059 | c.3175insTGC | GC | agctttaagtgcaggtgtgacagcggcTGCtttgctcttgattctgaagaaaggaactgc | |
| 1713 | c.5134_5137dup | TTCATTCA | gacctgtgatggagaattgttattcaTTCAacatgaccaagaagatgtgctgctgttcct | |
| 1149 | c.3444dup | CCCCCC | tgcccgcctggccatcagctgtcccccCaacatctccgcgtgtatcgacatcaatgaatg | |
| 1747 | c.5236_5240dup | ACACT | caagtacagatgagtttgctacactACACTctgtggaagtcaaaggccaggctttgtcat | |
| 311 | c.931dup | TTT | ggtgaatgtacaaacacagtcagcagttTacttttgcaaatgtccccctggtttttacac | |
| 2096 | c.6285dup | CCCCC | ttgaagggagaaggctggggagaccccCtgcgagctctgccccacggaacctgatgaggc | |
| 857 | c.2570dup | TT | accatcaagggcacttgctggcagactgtTcattgatgggcgatgtgagatcaacatcaa | |
| 2597 | c.7790dup | TT | tacaggtgcagctgcccccagggctacctTccagcactaccagtggaaccagtgtgttga | |
| 460 | c.1378dup | TT | tgattactgccagttggtccgctatctctTgtcaaaatggacgctgcattccaactcctg | |
| 1569 | c.4703_4704dup | AAAA | agcttcctgctgctgttctctgggtaaaAAgcctggggtactccttgtgagatgtgtcct | |
| 1834 | c.5499dup | TG | atcaacactgcaggcagctaccgctgtTgactgtaagcccggctaccgcttcacctccac | |
| 863 | c.2586dup | TG | tggcagactgtcattgatgggcgatgtTgagatcaacatcaatggagccaccttaaagtc | |
| 2078 | c.6231dup | TT | gaaagtgttcatcacccaaatccagaaatTcactccaagcaggaatgctgctgtgccttg | |
| 1078 | c.3228_3232dup | ATCTC | gacattgacgaatgccgcatatctcATCTCctgacctctgtggcagaggccagtgtgtga | |
| 2138 | c.6409_6411dup | TGTTGT | gacgaatgcaaagaacccgatgtctgtTGTaaacatggacagtgcatcaatacagatggt | |
| 2813 | c.8436dup | CC | tctttaaaatcaaccaaaaggaagggatcCagctacctccacttcacaaagaagaagcca | |
| 2373 | c.7116dup | TT | gctgctgtgacggagggagaggctggggtTccccactgtgagatctgccctttccagggg | |
| 2607 | c.7818dup | TGA | cagcactaccagtggaaccagtgtgttTgatgaaaacgaatgcctcagcgctcacatctg | |
| 1176 | c.3525dup | AA | gccccaatggccgttgcgtgaacctcataAgggaagtatcagtgtgcctgcaaccctggc | |
| 2676 | c.8027dup | CCC | agggcggttacctgtgtggctgtccaccCtggttacttccgcataggccaagggcactgt | |
| 1332 | c.3993_3994dup | CACACACA | caatgaatgtgaaattggagcacacaCAactgtggcaaacatgctgtatgtaccaataca | |
| 479 | c.1434dup | AAAA | tgggagttaccggtgtgagtgcaacaaaAgggttccagctggacctccgtggggagtgta | |
| 2845 | c.8534dup | TT | ctttataaaaagaaagaacttaaccaactTagaagacaaatatgacaaagactacctcag | |
| 1569 | c.4704dup | AAAA | agcttcctgctgctgttctctgggtaaaAgcctggggtactccttgtgagatgtgtcctg | |
| 1188 | c.3562dup | TTT | cagtgtgcctgcaaccctggctaccattTcaactcccgataggctattttgtgttgacat | |
| 2839 | c.8516dup | AGAA | atcagtagtactccactttataaaaaAgaaagaacttaaccaactagaagacaaatatga | |
| 932 | c.2793dup | GGGGGG | aatggcctgtgtgttaacactagggggGtcattcaagtgtcagtgtcccagtggaatgac | |
| 2659 | c.7974dup | CCCCCC | aatgaatgtggctctgcgcaggcccccCtgcagctatggctgttccaataccgagggcgg | |
| 1299 | c.3895insACAAAC | AAAC | ctgcctaagtgggacctgtgaaaacACAAACacgaaaggctcatttatctgccactgtga | |
| 1255 | c.3760_3764dup | TGCAC | atatctgtgatggtggtcagtgcacTGCACaaatatccctggagagtacaggtgcttgtg | |
| 986 | c.2956dup | GGGGG | tggacgcctgctgctgctccgtcggggGcagcctggggtactgaggaatgcgaggagtgt | |
| 2763 | c.8287dup | AA | tgcaagttgggatgttgagaagacagccaAtctttgctttcaatatttcccacgtcagta | |
| 450 | c.1348dup | AA | gccaccaagggtgctgccagtaaacgttaActgattactgccagttggtccgctatctct | |
| 1847 | c.5538_5539dup | GTGT | ggctaccgcttcacctccacaggacagtGTgcaatgatcgtaatgaatgtcaagaaatcc | |
| 658 | c.1971dup | GG | atggccgtgtgtgtgttgacacacacatgGcggagcacatgctatggtggatacaagaga | |
| 43 | c.123_127dup | GGCCA | aaggaaaccagagccagtcgggccaGGCCAagagaagaggcggtggaggacacgacgcgc | |
| 22 | c.63dup | GG | gatttaccgtgcttttagcgtcctacacgGagccatggggcggacgccaatttggaggct | |
| 2629 | c.7885_7886dup | TATA | cctcctgtcacaacaccctggggagctaTAcaagtgcatgtgtcccgccggcttccagta | |
| 653 | c.1957_1958dup | GTGTGTGTGTGT | gggtctggatggccgtgtgtgtgtGTtgacacacacatgcggagcacatgctatggtgga | |
| 103 | c.308dup | CCCC | gttcgaggccaaatatgtgcacttgcccCatctggtcagatagctccttcctgtggctcc | |
| 1349 | c.4046dup | GG | accaatacagcaggaagcttcaaatgtagGctgcagtcccgggtggattggagatggcat | |
| 1541 | c.4616_4620dup | GACCT | aaattgctatttggatattcgacctGACCTcgaggagacaatggagatacagcctgcagc | |
| 598 | c.1791_1792dup | TTTT | aatgaagatggcagttttaaatgtatttTTgcaaacctggattccagctggcatcagatg | |
| 1202 | c.3595_3605dup | GATGAATGCAG | ttgacattgatgaatgcagGATGAATGCAGcataatgaatggtggttgtgaaaccttctg | |
| 1263 | c.3787_3788dup | TGTG | gcacaaatatccctggagagtacaggtgTGcttgtgttatgatggattcatggcatctga | |
| 713 | c.2136dup | CAG | cagcggaatatcaggcactctgcagcCagtgggccaggaatgacgtcagcaggcagtgat | |
| 1428 | c.4283dup | GG | cagtgcctcaatgcaccaggaggataccgGctgtgaatgcgacatgggcttcgtgcccag | |
| 1436 | c.4304_4307dup | TCGTTCGT | cgctgtgaatgcgacatgggcttcgtTCGTgcccagtgctgacgggaaagcctgtgaaga | |
| 2673 | c.8011_8017dup | CTGTGTG | taccgagggcggttacctgtgtgCTGTGTGgctgtccacctggttacttccgcataggcc | |
| 2136 | c.6405_6406dup | TGTG | gatatggacgaatgcaaagaacccgatgTGtctgtaaacatggacagtgcatcaatacag | |
| 2609 | c.7826dup | AAAAA | ccagtggaaccagtgtgttgatgaaaaAcgaatgcctcagcgctcacatctgcggaggag | |
| 365 | c.1092_1094dup | ATGATG | gcagtgctgctgtgatgccggccgatgATGctggtctccaggggtcactgtcgcccctga | |
| 170 | c.509dup | AA | gtggccccaaatcgatgtgcatgcacttaAcggatttactggaccccagtgtgaaagaga | |
| 1330 | c.3989dup | CA | cagacatcaatgaatgtgaaattggagcCacacaactgtggcaaacatgctgtatgtacc | |
| 661 | c.1981dup | TT | gtgtgttgacacacacatgcggagcacatTgctatggtggatacaagagaggccagtgta | |
| 1719 | c.5157insGG | GCT | ttattcaacatgaccaagaagatgtgGGctgctgttcctacaacattggccgggcgtgga | |
| 1976 | c.5924_5925dup | ATAT | agatgggaggacctgtgtggatatcaatATgaatgtcttctagaacccagaaaatgtgca | |
| 2355 | c.7063dup | AA | aaacatgtgtcagatcggctccagcaacaAggaaccccgtcaccaaatcggaatgctgct | |
| 1735 | c.5203insCAA | AA | ggccgggcgtggaacaagccctgtgaaCAAcagtgtcccatcccaagtacagatgagttt | |
| 1278 | c.3833dup | GT | tcatggcatctgaagacatgaagacttgGtgtagatgtcaatgagtgtgacctgaatcca | |
| 127 | c.380dup | GGG | actgcaatattcgctgtatgaatggaggGtagctgcagtgacgatcactgtctatgccag | |
| 2623 | c.7868dup | AC | tcacatctgcggaggagcctcctgtcaAcaacaccctggggagctacaagtgcatgtgtc | |
| 2583 | c.7746_7747dup | GAGA | aaccaccgctgccagcatggctgccagaGAacatcattgggggctacaggtgcagctgcc | |
| 18 | c.52dup | GG | gatcgccctgggatttaccgtgcttttagGcgtcctacacgagccatggggcggacgcca | |
| 2630 | c.7887_7888dup | CACA | tcctgtcacaacaccctggggagctacaCAagtgcatgtgtcccgccggcttccagtatg | |
| 450 | c.1347_1348dup | TATA | ccaccaagggtgctgccagtaaacgttaTActgattactgccagttggtccgctatctct | |
| 2682 | c.8043dup | AA | gtggctgtccacctggttacttccgcataAggccaagggcactgtgtttctggaatgggc | |
| 2716 | c.8147dup | AA | gacaattcactctccccagaggcttgttaAcgagtgtaagatcaatggctaccccaaacg | |
| 1624 | c.4869dup | CC | cagggctgtgccaaggaggaaaatgtatcCaacacctttgggagtttccagtgccgctgt | |
| 1712 | c.5122_5134dup | GGAGAATTGTTAT | tgatggagaattgttatGGAGAATTGTTATtcaacatgaccaagaagatgtgctgctgtt | |
| 337 | c.1010dup | AC | gcatagatgttcgcccaggatactgttaAcacagctctgacaaacgggcgctgctctaac | |
| 1556 | c.4665_4666dup | TGTG | acagcctgcagcaatgaaattggagttgTGgtgtttccaaagcttcctgctgctgttctc | |
| 596 | c.1785dup | AAAA | gtgtatcaatgaagatggcagttttaaaAtgtatttgcaaacctggattccagctggcat | |
| 1076 | c.3227dup | TT | aactgcacagacattgacgaatgccgcatTatctcctgacctctgtggcagaggccagtg | |
| 858 | c.2571dup | CC | ccatcaagggcacttgctggcagactgtcCattgatgggcgatgtgagatcaacatcaat | |
| 249 | c.745dup | GG | ccgcacgggagcttgtcaagatgtggatgGaatgccaggccatccccgggctctgtcagg | |
| 476 | c.1426_1427dup | TGTG | caactcctgggagttaccggtgtgagtgTGcaacaaagggttccagctggacctccgtgg | |
| 2559 | c.7675dup | GG | ctgtgaatgccagcggggattctcacttgGatcagaccggctccagctgtgaagacgtgg | |
| 708 | c.2123dup | AA | tgtcctgcacagaattcagcggaatatcaAggcactctgcagcagtgggccaggaatgac | |
| 1321 | c.3960dup | TT | actccggcaaaaaaggaaaaactggctgtTacagacatcaatgaatgtgaaattggagca | |
| 2257 | c.6769_6770dup | GAGA | aggatgagtgtgaagagggaaaacatgaGActgtactgaaaaacaaatggaatgcaagaa | |
| 313 | c.934_937dup | TTTTTTTT | tacaaacacagtcagcagttacttttTTTTgcaaatgtccccctggtttttacacctctc | |
| 2736 | c.8206dup | AAAA | ggcaggaaacggagaagcacaaacgaaaActgatgcctccaatatcgaggatcagtctga |