The CSB mutations database

Deletions analysis

This option is used to check if a repeated sequence could be involved in the mutational event. The repeated sequences is usually localized at each extremity of the deletion. This situation if found habitually when a deletion involving more than 2 nt is present. When the deletion involves only 1 nt, it is mostly localized in a stretch of this nucleotide (polyC for example).
 

Total number of deletions: 11 (13 records)

Small deletions with known sequences: 11 (13 records)

Deletions involving repeated sequences: 5 (45.45 %) 

AA Position Mutation Repeated sequence Number of recordsDeletion
Repeated sequences
77 c.229_232delCGAC CGAC
1

aggagagggccagccctgctgcacatcgacCGACatcagatccaggcagtagagcctagcgc
aggagagggccagccctgctgcacatCGACCGACatcagatccaggcagtagagcctagcgc

860 c.2578_2580delCTG TG
1

atatggcacaagcagggtcagcgagtattgCTGttttctcagtcaaggcagatgctggaca
atatggcacaagcagggtcagcgagtatTGcTGttttctcagtcaaggcagatgctggaca

1263 c.3789_3790delCA CA
1

aaagcttttcaaaaaatcagttggcgtgcaCAgtgtcatgaagcacgatgccatcatggat
aaagcttttcaaaaaatcagttggcgtgCACAgtgtcatgaagcacgatgccatcatggat

500 c.1499delC CC
1

atgctgaatttgacgaaggttttaaagtgcCaggttttctgttcaaaaagctttttaagt
atgctgaatttgacgaaggttttaaagtgCCaggttttctgttcaaaaagctttttaagta

1179 c.3535delT TTTTT
1

tgggagaataaacaaatggaaaataattttTataagcacaagtcaaaaacaaaacatcat
tgggagaataaacaaatggaaaataaTTTTTataagcacaagtcaaaaacaaaacatcata