This option is used to check if
a repeated sequence could be involved in the mutational event.
The repeated sequences is usually localized at each extremity
of the deletion. This situation if found habitually when a deletion
involving more than 2 nt is present. When the deletion involves
only 1 nt, it is mostly localized in a stretch of this nucleotide
(polyC for example). |
|
Total number of deletions: 230 (1384 records) Small deletions with known sequences: 230 (1384 records) Deletions involving repeated sequences: 130 (56.52 %) |
|
|
By default, the following table is sorted by "number of records". You can sort the table in ascending or descending order or by clicking on the appropriate column.
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| AA Position | Mutation | Repeated sequence | Number of records | Deletion / Repeated sequences |
|---|---|---|---|---|
| 1309 | c.3927_3931delAAAGA | AAAGA | taataccctgcaaatagcagaaataaaagaAAAGAttggaactaggtcagctgaagatcctg | |
| 1068 | c.3202_3205delTCAA | CAA | gatgaaataaaacaaagtgagcaaagacaaTCAAggaatcaaagtacaacttatcctgttta | |
| 849 | c.2547_2550delTAGA | AGA | aagcttagatagttctcgttctgaaaaagaTAGAagtttggagagagaacgcggaattggtc | |
| 170 | c.509_512delATAG | ATAG | ctcaacttcagaatctcactaaaagaatagATAGtcttcctttaactgaaaatttttcctta | |
| 1465 | c.4393_4394delAG | AG | aataaagcacctactgctgaaaagagagagAGtggacctaagcaagctgcagtaaatgctg | |
| 658 | c.1972_1975delGAGA | AGA | acaaatgaggaccacaggcaaatcctaagaGAGAacaactgtctacaaactttattacaaca | |
| 698 | c.2093_2117del | AGCAT | tcctaaagaccaggaagcatTATGGGACATGGGGGCAGTTAGCATgctcaagaacctcattc | |
| 367 | c.1100_1101delCT | CT | tccagcttttacatggcaatgacaaagactCTgtattgttgggaaattcccggggcagtaa | |
| 1157 | c.3471_3474delGAGA | AGA | ctctgaagaagaacagcatgaagaagaagaGAGAccaacaaattatagcataaaatataatg | |
| 49 | c.147_150delACAA | AA | tgaggcatctaatatgaaggaagtacttaaACAActacaaggaagtattgaagatgaagcta | |
| 830 | c.2490_2491delGT | GT | tgtcctttcaccatatttgaatactacagtGTtacccagctcctcttcatcaagaggaagc | |
| 625 | c.1875_1878delGACA | CA | tttggttggcactcttacttaccggagccaGACAaacactttagccattattgaaagtggag | |
| 1514 | c.4541delC | CC | ccagcctgagtgctctgagcctcgatgagcCatttatacagaaagatgtggaattaagaa | |
| 275 | c.824delG | GG | gagtgggagaaatcaacatggcaacttctgGtaatggtcagggttcaactacacgaatgg | |
| 1551 | c.4652_4655delAAGA | AGA | agcctaaagaatcaaatgaaaaccaagagaAAGAggcagaaaaaactattgattctgaaaag | |
| 1556 | c.4666delA | AAAAAA | aatgaaaaccaagagaaagaggcagaaaaaActattgattctgaaaaggacctattagat | |
| 365 | c.1095delA | AAA | cctcatccagcttttacatggcaatgacaaAgactctgtattgttgggaaattcccgggg | |
| 1627 | c.4881delA | AAAA | tctaccatcacaaaacaggttgcaaccccaAaagcatgttagttttacaccgggggatga | |
| 1026 | c.3077delA | AAA | ataatgatggagaactagatacaccaataaAttatagtcttaaatattcagatgagcagt | |
| 1552 | c.4655_4656delAG | AG | ctaaagaatcaaatgaaaaccaagagaaagAGgcagaaaaaactattgattctgaaaagga | |
| 1066 | c.3196delA | AAA | atagaagatgaaataaaacaaagtgagcaaAgacaatcaaggaatcaaagtacaacttat | |
| 1302 | c.3904delC | CCC | acgacacaggaagcagattctgctaataccCtgcaaatagcagaaataaaagaaaagatt | |
| 1999 | c.5996delC | CC | agactgagccccctgactcacagggagaacCaagtaaacctcaagcatcaggctatgctc | |
| 1838 | c.5514delT | TTTT | aaataatgaagatagagtcagaggaagtttTgcttttgattcacctcatcattacacgcc | |
| 1942 | c.5826_5829delCAGA | CAGA | ttttccccagtcatccaaagacataccagaCAGAggggcagcaactgatgaaaagttacaga | |
| 144 | c.432delT | TT | agaagaacttgagaaagagaggtcattgctTcttgctgatcttgacaaagaagaaaagga | |
| 1246 | c.3736delG | GG | gcacagagtagaagtggtcagcctcaaaagGctgccacttgcaaagtttcttctattaac | |
| 1414 | c.4242_4245delAAGT | GT | cgttcagagtgaaccatgcagtggaatggtAAGTggcattataagccccagtgatcttccag | |
| 404 | c.1210delA | AAA | cagcctgatgacaagagaggcaggcgtgaaAtccgagtccttcatcttttggaacagata | |
| 1927 | c.5781delT | TT | aataaatcgaggtcagcctaaacccatactTcagaaacaatccacttttccccagtcatc | |
| 298 | c.893_894delAC | AC | cagccagtgttttgagttctagtagcacacACtctgcacctcgaaggctgacaagtcatct | |
| 1608 | c.4824delA | AAA | ttcaaaattacctccacctgtggcaaggaaAccaagtcagctgcctgtgtacaaacttct | |
| 1319 | c.3956delC | CC | aaaagattggaactaggtcagctgaagatcCtgtgagcgaagttccagcagtgtcacagc | |
| 1546 | c.4638_4642delTGAAA | AAA | aacagaatcagagcagcctaaagaatcaaaTGAAAaccaagagaaagaggcagaaaaaacta | |
| 1578 | c.4733_4734delGT | AT | atgatgatgatattgaaatactagaagaatGTattatttctgccatgccaacaaagtcatc | |
| 1652 | c.4954delT | TTTT | tattgtgttgaagggacacctataaactttTccacagctacatctctaagtgatctaaca | |
| 1381 | c.4142delC | CCCC | gtccacctgaacactatgttcaggagacccCactcatgtttagcagatgtacttctgtca | |
| 1464 | c.4391_4394delAGAG | AGAG | aaaataaagcacctactgctgaaaagagagAGAGtggacctaagcaagctgcagtaaatgct | |
| 775 | c.2324delA | AA | atgctcagcacttatcagaaacttttgacaAtatagacaatttaagtcccaaggcatctc | |
| 1396 | c.4187_4188delTT | TT | gatgtacttctgtcagttcacttgatagttTTgagagtcgttcgattgccagctccgttca | |
| 496 | c.1487_1499del | TA | gcttactaatgaccactacagtattaCACTAAGACGATAtgctggaatggctttgacaaact | |
| 1054 | c.3162_3163delCA | CA | acagaatgaaagatgggcaagacccaaacaCAtaatagaagatgaaataaaacaaagtgag | |
| 616 | c.1847delT | TTTTT | tatgtgctgtagatggtgcacttgcattttTggttggcactcttacttaccggagccaga | |
| 1924 | c.5772delA | AAA | aaagcagccaataaatcgaggtcagcctaaAcccatacttcagaaacaatccacttttcc | |
| 976 | c.2928_2929delAG | AG | tgtcagtagtagtgatggttatggtaaaagAGgtcaaatgaaaccctcgattgaatcctat | |
| 1211 | c.3631_3632delAT | AT | tcatctggacaaagcagtaaaaccgaacatATgtcttcaagcagtgagaatacgtccacac | |
| 1179 | c.3537_3543del | TTA | aaacgtcatgtggatcagcctattgattaTAGTTTAaaatatgccacagatattccttcatc | |
| 965 | c.2894delA | AAA | aatacaagagatcttcaaatgatagtttaaAtagtgtcagtagtagtgatggttatggta | |
| 1419 | c.4257delC | CCCC | atgcagtggaatggtaagtggcattataagCcccagtgatcttccagatagccctggaca | |
| 1373 | c.4118delC | CC | aaagtggtgctcagacacccaaaagtccacCtgaacactatgttcaggagaccccactca | |
| 1245 | c.3734delA | AAAA | ctgcacagagtagaagtggtcagcctcaaaAggctgccacttgcaaagtttcttctatta | |
| 122 | c.366delG | GGG | tgttcctatgggttcatttccaagaagaggGtttgtaaatggaagcagagaaagtactgg | |
| 2115 | c.6344delT | TTT | aggaaggtgcaaattccatagtaagtagttTacatcaagctgctgctgctgcatgtttat | |
| 717 | c.2149delA | AAAA | ctcaagaacctcattcattcaaagcacaaaAtgattgctatgggaagtgctgcagcttta | |
| 1636 | c.4906delG | GGGGG | ccccaaaagcatgttagttttacaccggggGatgatatgccacgggtgtattgtgttgaa | |
| 1156 | c.3468_3470delAGA | AGA | ttactctgaagaagaacagcatgaagaagaAGAgagaccaacaaattatagcataaaatat | |
| 592 | c.1775delT | TT | aatcaaccctcaaaagcgtattgagtgcctTatggaatttgtcagcacattgcactgaga | |
| 1178 | c.3532_3535delGATT | ATT | gaagagaaacgtcatgtggatcagcctattGATTatagtttaaaatatgccacagatattcc | |
| 496 | c.1488_1489delAC | AC | cgggcttactaatgaccactacagtattacACtaagacgatatgctggaatggctttgaca | |
| 684 | c.2051delT | TTT | tgacaatagtcagtaatgcatgtggaacttTgtggaatctctcagcaagaaatcctaaag | |
| 553 | c.1657delT | TT | gttattgcaagtgttttgaggaatttgtctTggcgagcagatgtaaatagtaaaaagacg | |
| 1462 | c.4384_4385delAA | AA | gtacctaaaaataaagcacctactgctgaaAAgagagagagtggacctaagcaagctgcag | |
| 1018 | c.3054_3057delTGGA | GA | acatagtgcaaatcatatggatgataatgaTGGAgaactagatacaccaataaattatagtc | |
| 1027 | c.3079delT | TT | aatgatggagaactagatacaccaataaatTatagtcttaaatattcagatgagcagttg | |
| 428 | c.1283_1293del | CATG | cctgttgggagtggcaggaagctcatgAACCAGGCATGgaccaggacaaaaatccaatgcca | |
| 425 | c.1273delG | GG | gcttactgtgaaacctgttgggagtggcagGaagctcatgaaccaggcatggaccaggac | |
| 935 | c.2804_2807delACAA | TT | gctctgctgcccatacacattcaaacacttACAAtttcactaagtcggaaaattcaaatagg | |
| 1550 | c.4648_4651delGAGA | AAG | gagcagcctaaagaatcaaatgaaaaccaaGAGAaagaggcagaaaaaactattgattctga | |
| 995 | c.2983delT | TTTT | tcctattctgaagatgatgaaagtaagtttTgcagttatggtcaatacccagccgaccta | |
| 136 | c.408delA | AA | aagcagagaaagtactggatatttagaagaActtgagaaagagaggtcattgcttcttgc | |
| 801 | c.2403delT | TTTTT | caagcaaagtctctatggtgattatgttttTgacaccaatcgacatgatgataataggtc | |
| 1309 | c.3925_3928delGAAA | AAAA | gctaataccctgcaaatagcagaaataaaaGAAAagattggaactaggtcagctgaagatcc | |
| 896 | c.2686_2693del | TCA | gattgccaaagtcatggaagaagtgtcaGCCATTCAtacctctcaggaagacagaagttctg | |
| 812 | c.2434_2437delGACA | CA | gacaccaatcgacatgatgataataggtcaGACAattttaatactggcaacatgactgtcct | |
| 1339 | c.4016delG | GGG | accctagaaccaaatccagcagactgcaggGttctagtttatcttcagaatcagccaggc | |
| 1482 | c.4446delT | TT | aaatgctgcagttcagagggtccaggttctTccagatgctgatactttattacattttgc | |
| 1099 | c.3295_3296delGT | GT | ttccaaccacattttggacagcaggaatgtGTttctccatacaggtcacggggagccaatg | |
| 1208 | c.3622delA | AAAA | tcaaagagttcatctggacaaagcagtaaaAccgaacatatgtcttcaagcagtgagaat | |
| 1925 | c.5775delC | CCC | gcagccaataaatcgaggtcagcctaaaccCatacttcagaaacaatccacttttcccca | |
| 1934 | c.5802_5803delCC | CC | acccatacttcagaaacaatccacttttccCCagtcatccaaagacataccagacagaggg | |
| 1062 | c.3184_3187delCAAA | AAA | cccaaacacataatagaagatgaaataaaaCAAAgtgagcaaagacaatcaaggaatcaaag | |
| 653 | c.1959delG | GG | cagcttgatagctacaaatgaggaccacagGcaaatcctaagagagaacaactgtctaca | |
| 795 | c.2385_2386delCT | CT | tcgtagtaagcagagacacaagcaaagtctCTatggtgattatgtttttgacaccaatcga | |
| 945 | c.2835_2843delinsT | AG | ||
| 1063 | c.3189_3192delTGAG | CAAAG | acacataatagaagatgaaataaaacaaagTGAGcaaagacaatcaaggaatcaaagtacaa | |
| 2018 | c.6053delC | CCCC | ctcctaaatcatttcatgttgaagatacccCagtttgtttctcaagaaacagttctctca | |
| 1156 | c.3467_3468delAA | AAG | gttactctgaagaagaacagcatgaagaagAAgagagaccaacaaattatagcataaaata | |
| 60 | c.180_181delinsC | AT | ||
| 394 | c.1180_1181delCA | CA | agtgcagcactccacaacatcattcactcaCAgcctgatgacaagagaggcaggcgtgaaa | |
| 1001 | c.3002delC | CCC | aaagtaagttttgcagttatggtcaataccCagccgacctagcccataaaatacatagtg | |
| 1093 | c.3279delT | TTTT | tgataaacacctcaagttccaaccacatttTggacagcaggaatgtgtttctccatacag | |
| 1193 | c.3579_3582delGTCA | CA | tgccacagatattccttcatcacagaaacaGTCAttttcattctcaaagagttcatctggac | |
| 1384 | c.4151_4161del | ATGT | actatgttcaggagaccccactcatgtTTAGCAGATGTacttctgtcagttcacttgatagt | |
| 1324 | c.3971delC | CC | ggtcagctgaagatcctgtgagcgaagttcCagcagtgtcacagcaccctagaaccaaat | |
| 745 | c.2234delC | CC | cgaagtacaaggatgccaatattatgtctcCtggctcaagcttgccatctcttcatgtta | |
| 961 | c.2882delA | AAA | atgccaaattagaatacaagagatcttcaaAtgatagtttaaatagtgtcagtagtagtg | |
| 852 | c.2555delT | TTT | atagttctcgttctgaaaaagatagaagttTggagagagaacgcggaattggtctaggca | |
| 581 | c.1742delA | AAAAA | cattgatggaatgtgctttagaagttaaaaAggaatcaaccctcaaaagcgtattgagtg | |
| 516 | c.1548_1548+1delinsTT | AAG | ||
| 1332 | c.3996delC | CC | agttccagcagtgtcacagcaccctagaacCaaatccagcagactgcagggttctagttt | |
| 330 | c.988_989delAT | AT | tcaatgcttggtactcatgataaggatgatATgtcgcgaactttgctagctatgtctagct | |
| 299 | c.896_897delCT | CT | ccagtgttttgagttctagtagcacacactCTgcacctcgaaggctgacaagtcatctggg | |
| 1434 | c.4300delA | AA | ccagatagccctggacaaaccatgccaccaAgcagaagtaaaacacctccaccacctcct | |
| 1158 | c.3473_3474delGA | GA | ctgaagaagaacagcatgaagaagaagagaGAccaacaaattatagcataaaatataatga | |
| 1058 | c.3172_3181del | AA | tgggcaagacccaaacacataatagaaGATGAAATAAaacaaagtgagcaaagacaatcaag | |
| 872 | c.2614_2636del | GA | ccagcaacagaaaatccaggaACTTCTTCAAAGCGAGGTTTGCAgatctccaccactgcagc | |
| 778 | c.2333_2349del | CA | cagaaacttttgacaatatagacaATTTAAGTCCCAAGGCAtctcatcgtagtaagcagaga | |
| 586 | c.1758_1759delAA | AA | tttagaagttaaaaaggaatcaaccctcaaAAgcgtattgagtgccttatggaatttgtca | |
| 1444 | c.4332_4335delAACA | CA | cagaagtaaaacacctccaccacctcctcaAACAgctcaaaccaagcgagaagtacctaaaa | |
| 280 | c.838delT | TT | aacatggcaacttctggtaatggtcagggtTcaactacacgaatggaccatgaaacagcc | |
| 1201 | c.3601delT | TT | cagaaacagtcattttcattctcaaagagtTcatctggacaaagcagtaaaaccgaacat | |
| 1533 | c.4598delA | AA | gaataatgcctccagttcaggaaaatgacaAtgggaatgaaacagaatcagagcagccta | |
| 900 | c.2700_2701delTC | TC | catggaagaagtgtcagccattcatacctcTCaggaagacagaagttctgggtctaccact | |
| 621 | c.1861_1864delACTT | CTT | ggtgcacttgcatttttggttggcactcttACTTaccggagccagacaaacactttagccat | |
| 627 | c.1879_1882delAACA | ACA | gttggcactcttacttaccggagccagacaAACActttagccattattgaaagtggaggtgg | |
| 792 | c.2375_2378delAGCA | CAA | aggcatctcatcgtagtaagcagagacacaAGCAaagtctctatggtgattatgtttttgac | |
| 1276 | c.3827_3830delCATT | TT | atactccaatatgtttttcaagatgtagttCATTatcatctttgtcatcagctgaagatgaa | |
| 187 | c.561delG | GG | tttttccttacaaacagatatgaccagaagGcaattggaatatgaagcaaggcaaatcag | |
| 1076 | c.3227delC | CC | gacaatcaaggaatcaaagtacaacttatcCtgtttatactgagagcactgatgataaac | |
| 1504 | c.4510_4513delTCCA | CA | gaaagtactccagatggattttcttgttcaTCCAgcctgagtgctctgagcctcgatgagcc | |
| 2113 | c.6337_6340delAGTA | AGTA | gctattcaggaaggtgcaaattccatagtaAGTAgtttacatcaagctgctgctgctgcatg | |
| 1085 | c.3255delA | AAA | tcctgtttatactgagagcactgatgataaAcacctcaagttccaaccacattttggaca | |
| 616 | c.1848_1848+1delinsTT | AAG | ||
| 181 | c.543_546delAACA | ACA | tcttcctttaactgaaaatttttccttacaAACAgatatgaccagaaggcaattggaatatg | |
| 190 | c.568delG | GG | ttacaaacagatatgaccagaaggcaattgGaatatgaagcaaggcaaatcagagttgcg | |
| 1012 | c.3035delA | AAA | ccgacctagcccataaaatacatagtgcaaAtcatatggatgataatgatggagaactag | |
| 1070 | c.3210_3213delTCAA | AA | aaaacaaagtgagcaaagacaatcaaggaaTCAAagtacaacttatcctgtttatactgaga | |
| 1986 | c.5957delC | CC | accaagaaaacaacaataaagaaaatgaacCtatcaaagagactgagccccctgactcac | |
| 1185 | c.3554_3555delCA | CA | agcctattgattatagtttaaaatatgccaCAgatattccttcatcacagaaacagtcatt | |
| 1609 | c.4826delC | CC | caaaattacctccacctgtggcaaggaaacCaagtcagctgcctgtgtacaaacttctac |